Message boards : Multicore CPUs : Ability to run our own peptide folding dynamics simulations?
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I have pdb or Chem3D models of peptides that I would like to run in a distributed folding application. I can only simulate 2 peptides currently with my P4 workstation. It seems to work well but it crashes the system over long runs. I would like to carry the simulation time past 1-10 us with over 100-200 peptides to illustrate the effect that I am current researching. How can I go about submitting jobs to my own PS3? | |
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 GDFVolunteer moderator Project administrator Project developer Project tester Volunteer developer Volunteer tester Project scientist Send message Joined: 14 Mar 07 Posts: 1957 Credit: 629,356 RAC: 0 Level  Scientific publications     | |
I have pdb or Chem3D models of peptides that I would like to run in a distributed folding application. I can only simulate 2 peptides currently with my P4 workstation. It seems to work well but it crashes the system over long runs. I would like to carry the simulation time past 1-10 us with over 100-200 peptides to illustrate the effect that I am current researching. How can I go about submitting jobs to my own PS3? For research work using CellMD you may want to contact me at ps3grid\"at\"gmail.com directly because it is independent from PS3GRID. | |
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Message boards : Multicore CPUs : Ability to run our own peptide folding dynamics simulations?
